Theoretical and Natural Science

- The Open Access Proceedings Series for Conferences


Theoretical and Natural Science

Vol. 9, 13 November 2023


Open Access | Article

From foundations to frontiers: Navigating survival analysis in the era of big data and deep learning

Jiaming Zhang * 1
1 Vanderbilt University

* Author to whom correspondence should be addressed.

Theoretical and Natural Science, Vol. 9, 14-21
Published 13 November 2023. © 2023 The Author(s). Published by EWA Publishing
This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Citation Jiaming Zhang. From foundations to frontiers: Navigating survival analysis in the era of big data and deep learning. TNS (2023) Vol. 9: 14-21. DOI: 10.54254/2753-8818/9/20240706.

Abstract

In the era of big data, survival analysis, a statistical method for analyzing the expected duration of time until one or more events happen, has gained significant importance, especially in medical and biological research. This paper primarily focuses on the comprehensive exploration and understanding of survival analysis modelling, from traditional to modern approaches, and identifies the existing challenges and future prospects of these models. We commence by discussing foundational models such as the Kaplan-Meier and Cox proportional hazards models, and then transition into the exploration of the more flexible Accelerated Failure Time model. Acknowledging the current challenges faced in survival analysis, such as dealing with high-dimensional data, lack of labelled data, and data quality and reliability, we further delve into the potential solutions provided by modern techniques like deep learning, transfer learning, and semi-supervised learning. Additionally, the paper highlights the issues of interpretability and transparency of complex models, offering an overview of interpretability methods such as LIME and SHAP. Despite certain limitations, our study offers a valuable reference for understanding the evolution of survival analysis and sparks further discussions about its future development, emphasizing the profound significance of survival analysis in the realm of statistical research.

Keywords

survival analysis, Kaplan-Meier model, Cox proportional hazards model, accelerated failure time model, deep learning

References

1. Emmert-Streib F., Dehmer M. Introduction to Survival Analysis in Practice. Machine Le-arning and Knowledge Extraction. 2019 Sep 8;1(3):1013–38. http://dx.doi.org/10.3390/make1030058

2. Flynn R. Survival analysis. Journal of Clinical Nursing. 2012;21(19pt20):2789–97. doi:10.1111/j.1365-2702.2011.04023.

3. Li Y., Zhao Q, Ma S. Recent Advances and Future Challenges for Biostatistics. Statistical Research. 2016 Jun;33. https://tjyj.stats.gov.cn/CN/10.19343/j.cnki.11-1302/c.2016.06.001

4. D. Cameron Watt, Aitchison T, MacKie Rm, Sirel JM. Survival analysis: the importance of censored observations. 1996 Oct 1;6(5):379–85.

5. Kaplan E.L., Meier P. Nonparametric Estimation from Incomplete Observations. Journal of the American Statistical Association. 1958 Jun;53(282):457–81. https://www.jstor.org/stable/2281868

6. Cox D.R. Regression Models and Life-Tables. Journal of the Royal Statistical Society Series B (Methodological). 1972;34(2):187–220. Available from: https://www.jstor.org/stable/2985181

7. Deo S.V., Deo V., Sundaram V. Survival analysis—part 2: Cox proportional hazards model. Indian Journal of Thoracic and Cardiovascular Surgery. 2021 Jan 2; 37:229–33.

8. Bradburn M.J., Clark T.G., Love S.B., Altman D.G. Survival Analysis Part II: Multivariate data analysis – an introduction to concepts and methods. British Journal of Cancer, 2003 Aug 1;89(3):431–6. Available from: https://www.nature.com/articles/6601119#Sec3

9. Bozinovski S. Reminder of the First Paper on Transfer Learning in Neural Networks, 19-76. Informatica. 2020 Sep 15;44(3). https://informatica.si/index.php/informatica/article/vi-ew/2828.

10. Liu X., Zachariah D., Wågberg J., Schön T.B. Reliable Semi-Supervised Learning when Labels are Missing at Random. arXiv. 2019 Oct 24.

11. Christoph Molnar. Interpretable machine learning: a guide for making Black Box Models interpretable. Morisville, North Carolina: Lulu, 2019.

Data Availability

The datasets used and/or analyzed during the current study will be available from the authors upon reasonable request.

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Volume Title
Proceedings of the 3rd International Conference on Computing Innovation and Applied Physics
ISBN (Print)
978-1-83558-129-2
ISBN (Online)
978-1-83558-130-8
Published Date
13 November 2023
Series
Theoretical and Natural Science
ISSN (Print)
2753-8818
ISSN (Online)
2753-8826
DOI
10.54254/2753-8818/9/20240706
Copyright
13 November 2023
Open Access
This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited

Copyright © 2023 EWA Publishing. Unless Otherwise Stated